SNP Profiles matching AMAZ 12

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	CC	AA	GG	TT	CT	AC	TT	TT	CC	TT	AA	GG	CT	AG
1._AMAZ_12_/4	CC	AA	GG	TT	CT	AC	TT	TT	CC	TT	AA	GG	CT	AG
2._RUQ_334	CC	AG	GG	TT	CT	AC	TT	TT	CC	CT	AA	GG	CT	AG
3._RUQ_334	_	AA	GG	TT	_	_	_	TT	_	_	_	_	CT	AG

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	CT	AT	GG	TT	CT	CG	GG	AA	CT	AA	GG	GT	CC	CC
1._AMAZ_12_/4	CT	AT	GG	TT	CT	CG	GG	AA	CT	AA	GG	GT	CC	CC
2._RUQ_334	CT	AT	GG	TT	CT	CG	GG	AA	CT	AA	GG	GT	CC	CC
3._RUQ_334	_	_	_	_	TT	CG	GG	_	CT	AA	CG	GT	CC	CC

	29	30	31	32	33	34	35	36	37	38	39	40
_Input profile	AA	GG	AT	CC	GG	CG	AC	CC	TT	AC	AT	GG	X_X	X_X
1._AMAZ_12_/4	AA	GG	AT	CC	GG	CG	AC	CC	GT	AC	AT	GG	X_X	X_X
2._RUQ_334	AA	AG	AT	CC	GG	CG	AC	CC	GT	AC	AT	GG	X_X	X_X
3._RUQ_334	AA	_	AT	CC	GG	CG	AC	CC	GT	AC	_	_	X_X	X_X

Input profile: AMAZ_12

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: 6B B94 T2

Dapeng Zhang, 2016

1._AMAZ_12_/4

98.8 %
40 shared markers

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: 6B B95 T3

Dapeng Zhang, 2016

2._AMAZ_12 RUQ_334

95 %
40 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2016

3._AMAZ_12 RUQ_334

93.8 %
24 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

Key to SNP Markers

Key to SNP Markers

1	TcSNP1520	2	TcSNP1484	3	TcSNP1458	4	TcSNP1442	5	TcSNP1414
6	TcSNP1350	7	TcSNP1270	8	TcSNP1253	9	TcSNP1165	10	TcSNP1144
11	TcSNP1075	12	TcSNP1062	13	TcSNP1060	14	TcSNP998	15	TcSNP994
16	TcSNP953	17	TcSNP929	18	TcSNP917	19	TcSNP891	20	TcSNP872
21	TcSNP723	22	TcSNP645	23	TcSNP619	24	TcSNP591	25	TcSNP577
26	TcSNP560	27	TcSNP534	28	TcSNP529	29	TcSNP469	30	TcSNP429
31	TcSNP372	32	TcSNP242	33	TcSNP230	34	TcSNP226	35	TcSNP193
36	TcSNP151	37	TcSNP150	38	TcSNP144	39	TcSNP32	40	TcSNP25